Alexey, Porollo Alexey Porollo
316 Kettering
Pub Med Articles  

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eLab of Aleksey Porollo


Children's Hospital Medical Center, Cincinnati, OH, USA; 2005 PostDoc in Bioinformatics
Tver State University, Tver, Russia; 1999 PhD in Chemistry
Mari State University, Yoshkar-Ola, Russia; 1995 MSc in Chemistry


2009: Next Generation Biomedical Investigator award, CEG, University of Cincinnati (USA)
2007: University of Cincinnati Research Council award (USA)
2002: German Academic Exchange Service (DAAD) one year scholarship (Germany)
1997: Mari El Republic Presidential post-graduate fellowship (Russia)

Professional Experience

2006-Present: Research Assistant Professor, University of Cincinnati, Cincinnati, OH, USA
2005-2006: Research Associate, Children's Hospital Research Foundation, Cincinnati, OH, USA
2002-2005: Postdoctoral Research Fellow, Children's Hospital Res. Found., Cincinnati, OH, USA
2000-2002: Researcher, Mari State University, Yoshkar-Ola, Russia
1999-2002: Senior Lecturer, Mari State University, Yoshkar-Ola, Russia
1994-1999: Junior Researcher, Mari State University, Yoshkar-Ola, Russia

Selected Publications

  • Porollo A, Meller J. Computational Methods for Prediction of Protein-Protein Interaction Sites. In: Protein-Protein Interactions - Computational and Experimental Tools; W. Cai and H. Hong, Eds. InTech 2012; 472: pp. 3-26.

  • Syed K, Porollo A, Lam YW, Yadav JS. A fungal P450 (CYP5136A3) capable of
    oxidizing polycyclic aromatic hydrocarbons and endocrine disrupting alkylphenols:
    role of Trp(129) and Leu(324). PLoS One. 2011;6(12):e28286.

  • Duran A, Amanchy R, Linares JF, Joshi J, Abu-Baker S, Porollo A, Hansen M, Moscat J, Diaz-Meco MT. p62 is a key regulator of nutrient sensing in the mTORC1 pathway. Mol Cell. 2011 Oct 7;44:134-46.

  • Porollo A, Meller J. POLYVIEW-MM: web-based platform for animation and
    analysis of molecular simulations. Nucleic Acids Res. 2010 Jul 1;38 Suppl:W662-6.

  • Korolev VL, Pivina TS, Porollo AA, Petukhova TV, Sheremetev AB, Ivshin VP. Differentiation of the molecular structures of nitro compounds as the basis for simulation of their thermal destruction processes. Russ Chem Rev. 2009; 78: 945-969.

  • Porollo A, Meller J. Prediction-based fingerprints of protein-protein
    interactions. Proteins. 2007 Feb 15;66(3):630-45.

  • Porollo A, Meller J. Versatile annotation and publication quality
    visualization of protein complexes using POLYVIEW-3D. BMC Bioinformatics. 2007
    Aug 29;8:316.

  • Cushion MT, Smulian AG, Slaven BE, Sesterhenn T, Arnold J, Staben C, Porollo
    , Adamczak R, Meller J. Transcriptome of Pneumocystis carinii during fulminate
    infection: carbohydrate metabolism and the concept of a compatible parasite. PLoS
    One. 2007 May 9;2(5):e423.

  • Cao B, Porollo A, Adamczak R, Jarrell M, Meller J. Enhanced recognition of
    protein transmembrane domains with prediction-based structural profiles.
    Bioinformatics. 2006 Feb 1;22(3):303-9.

  • Adamczak R, Porollo A, Meller J. Accurate prediction of solvent accessibility using neural networks-based regression. Proteins. 2004 Sep 1;56(4):753-67.

  • Porollo AA, Lushnikov DE, Pivina TS, Ivshin VP. Computer Representation and Generation of Possible Pathways for Thermal Decomposition Reactions of Organic Compounds. J Mol Struc (THEOCHEM). 1997; 391: 117-124.

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